PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019188082.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 389aa MW: 39823 Da PI: 9.4894

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019188082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	8e-39	74	132	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s XP_019188082.1 74 ETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRS 132 6789*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MVFSSIPAYL DPANWQQLNH QVGTSIQTTQ LPSAQPAAVA AAAAAPPPPH GSAGTIRPGS 60 MADRARLANM PIPETALKCP RCESTNTKFC YFNNYSLTQP RHFCKTCRRY WTRGGALRNV 120 PVGGGCRRNK RSGKGGSSSG GGGSASKSPS NSSERQAGSS SCSGVSTSSI NISGNSAAGL 180 LGGAGLSPQI PPMRFMSPLG QLSEHYTAGN DNIGLNINYT GLSAMAGRDN FPFQFGNNNN 240 NNNNSNNNNN LLGLGGGGGG GPGGGGGLAS LLSGGIEQWR LQTPILGGLD LSPSPGLYQF 300 PGGPEAAPSG FLGGEASETR PKFTSSSMLT TQMASVKMED HNNQESSMAR QLLGFQPGND 360 QWGGGGGGAA AAWSDVSASF TSSSTSNRL

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MVFSSIPAYL DPANWQQLNH QVGTSIQTTQ LPSAQPAAVA AAAAAPPPPH GSAGTIRPGS  60
MADRARLANM PIPETALKCP RCESTNTKFC YFNNYSLTQP RHFCKTCRRY WTRGGALRNV  120
PVGGGCRRNK RSGKGGSSSG GGGSASKSPS NSSERQAGSS SCSGVSTSSI NISGNSAAGL  180
LGGAGLSPQI PPMRFMSPLG QLSEHYTAGN DNIGLNINYT GLSAMAGRDN FPFQFGNNNN  240
NNNNSNNNNN LLGLGGGGGG GPGGGGGLAS LLSGGIEQWR LQTPILGGLD LSPSPGLYQF  300
PGGPEAAPSG FLGGEASETR PKFTSSSMLT TQMASVKMED HNNQESSMAR QLLGFQPGND  360
QWGGGGGGAA AAWSDVSASF TSSSTSNRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	3e-43	Dof family protein