PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019187648.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 219aa    MW: 23675.8 Da    PI: 5.1148
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019187648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-1958109155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +gy+GVr++k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a ++l+g
  XP_019187648.1  58 PGYRGVRRRKSTGKWVSEIREP-----RspNRIWLGTFATPEMAAVAYDVAVRALRG 109
                     79*******************9.....4489************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MARLWESLQC VIIVLFFMKP KNNRRGGLRC VNVVMSKNTK TGNVSEGSEP GSSLGRSPGY  60
RGVRRRKSTG KWVSEIREPR SPNRIWLGTF ATPEMAAVAY DVAVRALRGP NAELNFPNSA  120
ASLPVPASNS ARDIQAAAAT AAAALGAAAD ALEVPKEGGD ELDNNNSEEC KEFVDEDMIF  180
DMPNVLVNMA EGMLLSPPRL DVAGDWDATA ADHNLWNYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-52ERF family protein