PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019187580.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 291aa    MW: 33071.8 Da    PI: 5.0105
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019187580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.74e-202978255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+WvAeIr+p++   r+r++lg+f taeeAa a+++a+++l+g
  XP_019187580.1 29 EYRGVRQRT-WGKWVAEIREPKK---RTRIWLGSFATAEEAAMAYDEAARRLYG 78
                    69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDNYRRNPLK PWKKGPARGK GGPQNAMCEY RGVRQRTWGK WVAEIREPKK RTRIWLGSFA  60
TAEEAAMAYD EAARRLYGPE AYLNLPHLRS NINPLINKST HHNKFKWFPS TNFISLFPSS  120
GLLNLSAQPS VHVIHQRLQE LKKTEASCHA SSSSSSSSEM LNMMEQPGLV NQETTEKEPD  180
FSSGEKLVNR EEKPQIDLNE FLQQLGILQK EDKSDVHDLS NCFPEPEPEP EPEPEPSLGD  240
SEADVFADKT YNWDTLEAIP GTEDNQTVDA TSLYLHDIND DLSFPPSVWN F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.15e-77ERF family protein