PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019187423.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 470aa MW: 50299.8 Da PI: 5.9385

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019187423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.7	3.8e-16	267	322	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l +++++ + XP_019187423.1 267 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNE 322 689*****************************************999999998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MDRVFSVEDI ADQFWSPPPV RLSQAADLDI DSSASSKVMN RSSSEWAFQR FLQEASANSS 60 PAAVAAVDQA AAPPSSVAAA SSATSSSHSQ KSLPSDVVEI QGGRLDADRK SDYGYKSSGK 120 EVETVTATTT AKTTTSLGSG AASDIPIDSE DYQAFLKKRL DLACAAVALT RANNMKAQDS 180 ASVPSENTSL ASHTPQLGSQ TPVKVPAHDL PKVQEEEAGG PIGIPSLPSM QKKLVAQVKS 240 TTSGSEQSED EEAEGEAETT DKTNPADVKR VRRMLSNRES ARRSRRRKQA HLTELETQVS 300 QLRVENSSLL KRLTDISQKY NESAVDNRVL KADVETLRAK VKMAEEAVKR ATGLNPLFQA 360 MPEIPTMGLP PFAGSPDTSS DASVPVQDDL KHHFYQPPSN SGIPTHNPGM QNGLVDIPPI 420 DDAKQGPTAS EAAGANKMGR TASMQRVASL EHLQKRIRGE VGSSERDQKQ

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MDRVFSVEDI ADQFWSPPPV RLSQAADLDI DSSASSKVMN RSSSEWAFQR FLQEASANSS  60
PAAVAAVDQA AAPPSSVAAA SSATSSSHSQ KSLPSDVVEI QGGRLDADRK SDYGYKSSGK  120
EVETVTATTT AKTTTSLGSG AASDIPIDSE DYQAFLKKRL DLACAAVALT RANNMKAQDS  180
ASVPSENTSL ASHTPQLGSQ TPVKVPAHDL PKVQEEEAGG PIGIPSLPSM QKKLVAQVKS  240
TTSGSEQSED EEAEGEAETT DKTNPADVKR VRRMLSNRES ARRSRRRKQA HLTELETQVS  300
QLRVENSSLL KRLTDISQKY NESAVDNRVL KADVETLRAK VKMAEEAVKR ATGLNPLFQA  360
MPEIPTMGLP PFAGSPDTSS DASVPVQDDL KHHFYQPPSN SGIPTHNPGM QNGLVDIPPI  420
DDAKQGPTAS EAAGANKMGR TASMQRVASL EHLQKRIRGE VGSSERDQKQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	289	RRSRRRKQ
2	284	289	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.1	1e-60	bZIP family protein