PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019187242.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 907aa MW: 100813 Da PI: 6.6471

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019187242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.3	1.8e-29	587	638	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l+ l++yF++++kdAAk+Lgvc+T+LKriCRq+GIkRWP+Rkik++ XP_019187242.1 587 AEKTITLQILQQYFAGSLKDAAKSLGVCPTTLKRICRQHGIKRWPSRKIKKV 638 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 907 aa Download sequence
MDESVFPSSI VLNTTSDSSF MDLDDLLFEG CWLETTDGSE FFQHSPFNAN ALFEPSYVLP 60 DLEPNNGELM KESEVERKKS SLPENLSASQ FHTERVQCFG QNGSNAVCSS GLAESSELSR 120 RWWIGPMATT SVMDRLIQAL GYIKDFSRDK DVLIQIWVPV NRDGRRVLVT GDQPFQLDLK 180 CPRLAHYRDI SINYEFPVEE DSQENVGLPG RVFLGKVPEW TPDVQLFKRE EYPRVGHAQR 240 YDVRGTFAVP VFDQGSRTCL GVIEVVLTTQ KVKYRNELDS VCKALEEVDL RGSKISNVRN 300 VKTCHSYQVV LPEILEVLKS ACATHKLPLA QTWVPCVQQG KEGLRHSDEN LLRCVSTVDS 360 ACYIADPRIQ GFHEACSEHH LLKGLGVVGR AFMTNQPCFS ADITSFSKTE YPLSHYARIF 420 SLQAAVAIRL RSTCTGSTDF VLEFFLPRDC KSPEEHKRML TSLSIIIQNV CQTLRVVTEQ 480 ELEEETTSPS SKVAKHSDIR IHKEVPNLKY NSSIGPCEEG LSWTSSPMLV QESCMSSSAF 540 QNEKPSELLY KRLPEFVSGS GLSFDSTSGE GSAQNVRRAG DKKRMKAEKT ITLQILQQYF 600 AGSLKDAAKS LGVCPTTLKR ICRQHGIKRW PSRKIKKVGH SLQKIRRVID SVQGASGALQ 660 IETFYSNFPE LASPNVSRSN PISDEQHPSL LNRQHEGENV CPNGSASKSP SSSGSQSSSS 720 SQCCSSGTQP SPCTLHAAAP EAAAAVREES VNGVVKRVKS DAELLVSNDG LTTTTLPRSQ 780 SHASLSEHPK SECLPPTKDG PRVKVTFGEE KIRFRLQSQW GYQDVLKEIA RRFGIDDPRG 840 FQLKYLDDDL EWVLLTCDAD LEECIDVCRA SQNQTIRLAF LCNSQHQFGS SLGSKNPSAS 900 GINMVFS

Sequence ? help Back to Top

Protein Sequence Length: 907 aa Download sequence

MDESVFPSSI VLNTTSDSSF MDLDDLLFEG CWLETTDGSE FFQHSPFNAN ALFEPSYVLP  60
DLEPNNGELM KESEVERKKS SLPENLSASQ FHTERVQCFG QNGSNAVCSS GLAESSELSR  120
RWWIGPMATT SVMDRLIQAL GYIKDFSRDK DVLIQIWVPV NRDGRRVLVT GDQPFQLDLK  180
CPRLAHYRDI SINYEFPVEE DSQENVGLPG RVFLGKVPEW TPDVQLFKRE EYPRVGHAQR  240
YDVRGTFAVP VFDQGSRTCL GVIEVVLTTQ KVKYRNELDS VCKALEEVDL RGSKISNVRN  300
VKTCHSYQVV LPEILEVLKS ACATHKLPLA QTWVPCVQQG KEGLRHSDEN LLRCVSTVDS  360
ACYIADPRIQ GFHEACSEHH LLKGLGVVGR AFMTNQPCFS ADITSFSKTE YPLSHYARIF  420
SLQAAVAIRL RSTCTGSTDF VLEFFLPRDC KSPEEHKRML TSLSIIIQNV CQTLRVVTEQ  480
ELEEETTSPS SKVAKHSDIR IHKEVPNLKY NSSIGPCEEG LSWTSSPMLV QESCMSSSAF  540
QNEKPSELLY KRLPEFVSGS GLSFDSTSGE GSAQNVRRAG DKKRMKAEKT ITLQILQQYF  600
AGSLKDAAKS LGVCPTTLKR ICRQHGIKRW PSRKIKKVGH SLQKIRRVID SVQGASGALQ  660
IETFYSNFPE LASPNVSRSN PISDEQHPSL LNRQHEGENV CPNGSASKSP SSSGSQSSSS  720
SQCCSSGTQP SPCTLHAAAP EAAAAVREES VNGVVKRVKS DAELLVSNDG LTTTTLPRSQ  780
SHASLSEHPK SECLPPTKDG PRVKVTFGEE KIRFRLQSQW GYQDVLKEIA RRFGIDDPRG  840
FQLKYLDDDL EWVLLTCDAD LEECIDVCRA SQNQTIRLAF LCNSQHQFGS SLGSKNPSAS  900
GINMVFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein