PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019186693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 290aa MW: 32181.5 Da PI: 8.3038 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00021 | 228 | 250 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C+++Fs+ +L+ H ++ H XP_019186693.1 228 QCPQCNTRFSSVVDLVDHVQNvH 250 7*****************99888 PP | |||||||
2 | zf-C2H2 | 12.4 | 0.00047 | 262 | 284 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 Cp C+k F ++ +L+ H + H XP_019186693.1 262 ICPRCSKGFHDPVSLVEHVEReH 284 5*****************99888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGTPALPNLG KHCSVDDCRQ IDFLPFTCDC CQKVFCLEHR SYLRHHCPKA NKNDVTVVVC 60 PLCAKGVHLI PDEDPNVTWE SHVNIDCDPS NYETSTKKRK CPVPGCKELL TFSNTIKCRE 120 CNLDHCLKHR FGPDHKCPGP RKPETSFPFM GYLSKSRKDE TKHAPATSSS SWTATFLGAT 180 SSVRAKAGAG MAKLSTEFNQ ALQKGKDRGS LNSRATRQAG NASGNVEQCP QCNTRFSSVV 240 DLVDHVQNVH ERKSVTNLAV DICPRCSKGF HDPVSLVEHV EREHRNFTSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41835.1 | 1e-116 | C2H2 family protein |