PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019186512.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 388aa MW: 43829.9 Da PI: 9.8584

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019186512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	101.6	1.1e-31	23	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdke 91 lppG F Ptd+el+++yLk ++++ k++ +i+++diy+++P++L+ +++ + ++yfF+ ++k+++gkr ra+ +g+Wka+ ++ XP_019186512.1 23 LPPGHGFYPTDQELITKYLKYRAQNLKIHP-GIINDLDIYNHHPKELEGayGLNEWNGRMYFFTAFKRKTKEGKRGDRAVGggKGFWKASQAREK 116 79***********************999.89**********9412333333366**************97766999***** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v++ +g ++g+k+ Lvf+ + kg+kt+W+m e+r XP_019186512.1 117 VKDDEGVVIGTKQPLVFH---DGKGTKTSWLMSEFRY 150 **************...567889******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MASCSGNKLP NGYGDEYEWK RSLPPGHGFY PTDQELITKY LKYRAQNLKI HPGIINDLDI 60 YNHHPKELEG AYGLNEWNGR MYFFTAFKRK TKEGKRGDRA VGGGKGFWKA SQAREKVKDD 120 EGVVIGTKQP LVFHDGKGTK TSWLMSEFRY PENFNPLPLY NQTEHELALC VIYYHGERNI 180 IGNNQESKSN NTNPMKRNII CNNQESKSNN TNPMKRNIIC NNQESKSNNT NPMKRNIIGN 240 NQEYKSNNTN PMKNLQSSHL IPTPCPNPNF TTTSNLQNPN HPPYPTLNPN FNATFARQSP 300 NHLPSPAQNS NFIATSSLYP TQNPNFSATF TMQNPNHPPS PTQNPNFIAT TSSMQNPNHS 360 LSFAQNPNFI VASSLPKLPS LTTFNPKP

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MASCSGNKLP NGYGDEYEWK RSLPPGHGFY PTDQELITKY LKYRAQNLKI HPGIINDLDI  60
YNHHPKELEG AYGLNEWNGR MYFFTAFKRK TKEGKRGDRA VGGGKGFWKA SQAREKVKDD  120
EGVVIGTKQP LVFHDGKGTK TSWLMSEFRY PENFNPLPLY NQTEHELALC VIYYHGERNI  180
IGNNQESKSN NTNPMKRNII CNNQESKSNN TNPMKRNIIC NNQESKSNNT NPMKRNIIGN  240
NQEYKSNNTN PMKNLQSSHL IPTPCPNPNF TTTSNLQNPN HPPYPTLNPN FNATFARQSP  300
NHLPSPAQNS NFIATSSLYP TQNPNFSATF TMQNPNHPPS PTQNPNFIAT TSSMQNPNHS  360
LSFAQNPNFI VASSLPKLPS LTTFNPKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	3e-24	NAC family protein