PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019186494.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YA | ||||||||
Protein Properties | Length: 284aa MW: 31354.4 Da PI: 7.5472 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 96.2 | 3.7e-30 | 133 | 189 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RR Rak+e ekk +k+r+pylheSRh+hAlrR+RgsgGrF XP_019186494.1 133 EEPVYVNAKQYNGILRRRRVRAKAELEKKA-IKARRPYLHESRHQHALRRERGSGGRF 189 69***************************9.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MQPWWRGFGD NGMPTFGQET NGSISFETNE SQGNAEGGGN KEKETNSTAQ SGLNESNSQD 60 EQHLKHASSI PAVMSEQLGA NSQMELVGHS IMLASYPYAD PQYGGMFSYC SPVQSHLFGL 120 HHARMPLPLE MEEEPVYVNA KQYNGILRRR RVRAKAELEK KAIKARRPYL HESRHQHALR 180 RERGSGGRFL NTKKLNDMNS KTDEHTQSGA TATTNSGHSS GSEHLCTNSE GQSAVKEMCR 240 ADSHGFPSVH FTESSGNEKG SFRHGHQNWS FMGNQAPHGA PPSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.1 | 2e-23 | NF-YA family protein |