PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186357.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 278aa    MW: 30896 Da    PI: 8.006
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.61.3e-1491143155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR+++N  f+ Lr+llP  +   ++ ++s  +++ ++v+YI +Lq
  XP_019186357.1  91 KKLSHNASERDRRKKMNGLFSSLRSLLPAsD---QKARMSIPTTVSRVVKYIPELQ 143
                     6789*************************66...9999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MVALFSPMSF PNMGWSIDDY ISHEQFGTDL YSNAAGDTSP DAPPPHFVSL PSSPLPPAME  60
RCDSLKFDGG STDIGSGGGG GGDSATAGMV KKLSHNASER DRRKKMNGLF SSLRSLLPAS  120
DQKARMSIPT TVSRVVKYIP ELQKELERLQ KKKQELTSRV NSWQKISKSP PEFNKRRRVM  180
GGHHHNRQSY LSATQVGERD IVIQICSKKG TQNLFADALS CLEQEGLVLL DSSTFQTSED  240
RVNFHTLHLQ VQGIEMMEVD KLKEKLLSYF NEEQTCLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175179KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56980.14e-32bHLH family protein