PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019186336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | AP2 | ||||||||
Protein Properties | Length: 390aa MW: 43650 Da PI: 4.6568 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.3 | 5.3e-15 | 60 | 118 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++gr++A+++d ++n+ k+ ++++lg + ++e Aa+ ++ a++k++g XP_019186336.1 60 AYRGVTRHRWTGRYEAHLWDkTTWNNiqnKKgRQIYLGAYESEEAAARTYDLAALKYWG 118 69******************666699977447*************************98 PP | |||||||
2 | AP2 | 51 | 3.6e-16 | 161 | 212 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg+f t eeAa+a++ a+ +++g XP_019186336.1 161 SKYRGVARHHHNGRWEARIGRVL--G-TKYLYLGTFSTQEEAAEAYDMAAIEYRG 212 89****99**********98841..2.5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MKRSAPSSSS PSSSSSSSSS CIQLPPAGQP VASPEPRPAK RSRAKRTANA DSTPARRSSA 60 YRGVTRHRWT GRYEAHLWDK TTWNNIQNKK GRQIYLGAYE SEEAAARTYD LAALKYWGAS 120 ATLNFPVETY DKEIEEMQPL SKEEYLASLR RQSSGFSRGV SKYRGVARHH HNGRWEARIG 180 RVLGTKYLYL GTFSTQEEAA EAYDMAAIEY RGPNAVTNFD VSRYADVLNK IREREQLQQM 240 AGNPESSVEV QSGEQSDQDQ ENAGEKQEGA EEVNNEEHPW KPEFPKMEEE VVGVLEPRVP 300 EMEFAPPPPP VEASSAAMLM MDPAAEEHDS AWNVFLDPGF EQFLNTSDDL FSIFNSPFDD 360 DIDSIFGEQL IEKEFVQAGI LSSVNEFPAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.1 | 1e-102 | AP2 family protein |