PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019185886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | E2F/DP | ||||||||
Protein Properties | Length: 352aa MW: 39408 Da PI: 9.3639 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 72.7 | 4e-23 | 21 | 86 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rkeksL++l+++fl+l+ + + + + l+++a++L v +rRRiYDi+N+Le+++l+++++kn+++wkg XP_019185886.1 21 RKEKSLGVLCSNFLRLYDRDDVDCIGLDHAADQL---GV--ERRRIYDIVNILESVGLLSRRAKNQYTWKG 86 79****************9999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 73.8 | 1.9e-23 | 142 | 222 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL lltq+f+kl+ +s+ + ++l+++a++L+ + +++k+RR+YDi+NV+ ++nliek + k+++rw+g XP_019185886.1 142 RKEKSLALLTQNFIKLFLCSDVEFISLENAASALLGNmhdptAMRTKVRRLYDIANVFASMNLIEKirhpeSGKPAFRWIG 222 79********************************999*********************************99*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MSSSSVHSDS QSKNPTGSYS RKEKSLGVLC SNFLRLYDRD DVDCIGLDHA ADQLGVERRR 60 IYDIVNILES VGLLSRRAKN QYTWKGFAAI PRTLDALKEE GLREKLSGQN IANVSRENEY 120 RQPSNSSTKQ DNTHELLKGD NRKEKSLALL TQNFIKLFLC SDVEFISLEN AASALLGNMH 180 DPTAMRTKVR RLYDIANVFA SMNLIEKIRH PESGKPAFRW IGQVGNPGNG YGSAAANVTD 240 LKRTFGADIT NTVPKRYKAG SSSDWKPSEH ATQYAKHGNL KDENSKVSPD RHKHGSKDFE 300 FGPFSPSSVP REVLGNINVG QIPNWENLAS TYRPRYCNKA DADEKQHDQH LP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01330.1 | 1e-103 | E2F/DP family protein |