PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019185785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 334aa MW: 37597.2 Da PI: 6.0492 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58 | 2.2e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +++ +v+ +G g+W++++++ g++R++k+c++rw +yl XP_019185785.1 15 RGPWTPEEDAKILAYVASHGIGNWTLVPQKAGLNRCGKSCRLRWTNYL 62 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3.1e-16 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++T+eE+ +++++k G++ W++Ia++++ gRt++++k++w++ XP_019185785.1 69 DNFTPEEEACILELHKTIGSR-WSLIAKHLP-GRTDNDVKNYWNT 111 68*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MMGRPPCCDK ANVKRGPWTP EEDAKILAYV ASHGIGNWTL VPQKAGLNRC GKSCRLRWTN 60 YLRPDLKHDN FTPEEEACIL ELHKTIGSRW SLIAKHLPGR TDNDVKNYWN TKLKKKLKNM 120 GIDPLTHKPF SQVFAEFGKL SGLPSPSNQN ALLKNTIKNE ALFEPEPRSF PTNSRFVSAE 180 MNQHLQIQNS PLVHNFPREP IQPPHSFTSS QYCSSSYEQP LSQFLTSSSS TPWNEFILQD 240 PCPMADTELP RQDSKFPGTF SSDDPMTPSV QGEAGPICGF TNEGMNEDIT EGLTDKSHGE 300 ASSSMAEDSF VENILARDRQ MQLEYPQLLD GYFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 9e-84 | MYB family protein |