PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019185496.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 493aa MW: 53162.8 Da PI: 4.6557

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019185496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.6e-39	135	195	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_019185496.1 135 PDKILPCPRCNSMETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSG 195 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MSDSSKDPAI KLFGKTIQLP EIPAPTEGSC PDDAAAAPPF DTPGDDDSSA RHGSCSGNDP 60 AEDGGGGEED EHLQKNQNGG KLDESKEDES LMAEELTDQT NEMETDESKT PSTNKDCGAM 120 KKSEAEEQEK ALKKPDKILP CPRCNSMETK FCYFNNYNVN QPRHFCKNCQ RYWTAGGTMR 180 NVPVGAGRRK NKNSGSHYRH VTISEPFPSA RVDLPNGIQL PTINPNGALL SFGSDTPLCE 240 SMASVLNIAE KTMQNGSING FHKLEELGVP GSHGEDRSSG SSVTAASTED ESVKNEVPDM 300 RRQNCPSFAP QLPCFPGAPW PYPLTAVQWS SAIPGAPPPG YCPPGFPMPV YPAPAYWGCA 360 VPGSWSVPWV SPPGFSMPST SGPNSPTLGK HSRDENMLKP VNSEEEDPKK ESNPEKCLWV 420 PKTLRIDDPE DAAKSSIWAT LGIKNDKADS VGSGLFKAFQ SKDDEKTDAS ENSTVLQANP 480 AALSRSLNFH ENS

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MSDSSKDPAI KLFGKTIQLP EIPAPTEGSC PDDAAAAPPF DTPGDDDSSA RHGSCSGNDP  60
AEDGGGGEED EHLQKNQNGG KLDESKEDES LMAEELTDQT NEMETDESKT PSTNKDCGAM  120
KKSEAEEQEK ALKKPDKILP CPRCNSMETK FCYFNNYNVN QPRHFCKNCQ RYWTAGGTMR  180
NVPVGAGRRK NKNSGSHYRH VTISEPFPSA RVDLPNGIQL PTINPNGALL SFGSDTPLCE  240
SMASVLNIAE KTMQNGSING FHKLEELGVP GSHGEDRSSG SSVTAASTED ESVKNEVPDM  300
RRQNCPSFAP QLPCFPGAPW PYPLTAVQWS SAIPGAPPPG YCPPGFPMPV YPAPAYWGCA  360
VPGSWSVPWV SPPGFSMPST SGPNSPTLGK HSRDENMLKP VNSEEEDPKK ESNPEKCLWV  420
PKTLRIDDPE DAAKSSIWAT LGIKNDKADS VGSGLFKAFQ SKDDEKTDAS ENSTVLQANP  480
AALSRSLNFH ENS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-108	Dof family protein