PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185230.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 261aa    MW: 29315.5 Da    PI: 6.9859
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.13.6e-3253108359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     k rY+eC+kNhA+ +GghavDGCgEfmp+ ge gt +alkCaAC+CHRnFHR+e ++
  XP_019185230.1  53 KPRYRECQKNHAVGIGGHAVDGCGEFMPA-GEYGTLDALKCAACNCHRNFHRKEINT 108
                     679*************************9.888********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MEFEDQQHSG GNGTGPSYDS LSNSNSAHPR MPEDDDNGGG DLPVTEPPLQ MRKPRYRECQ  60
KNHAVGIGGH AVDGCGEFMP AGEYGTLDAL KCAACNCHRN FHRKEINTAA ALIPVGYHHH  120
HRAPSGYLHH HHHHHHAPLQ RPLALPSISG SAYREEMEEL DLDMDTATPN SGGGGSKGKR  180
FRTKFTEVQK EKMVELAERL GWRIQKESEE AVEQFCIEYG VRRHVFKVWM HNNKHTVAKK  240
TLEQNNNNNT TNQPDQDPPR I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.19e-59ZF-HD family protein