PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185198.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family TCP
Protein Properties Length: 281aa    MW: 30784.9 Da    PI: 8.8609
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP93.93.2e-2967135270
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa 70 
                      g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl +ak  i++l+ ++ ++ 
  XP_019185198.1  67 FGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLDAAKGDIDQLPPLQIPPR 135
                     689************************************************************966555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MITREVDFCN AATKEEGDNS SDVKVNVPGK TATVAGFSSS SRPTTLSSST SWTRLKDPRI  60
VRVSRAFGGK DRHSKVCTVR GLRDRRVRLS VPTAIQLYDL QDRLGLNQPS KVVDWLLDAA  120
KGDIDQLPPL QIPPRIFDPY FTAPPSTADS TPPPPPPSFT SFLRWDPSTP PPPPHPKPED  180
HFHSFNNVVL SSPSFPSTAA VSSQVLVCPP PGLQPYSFLH PAASPPELDL KQIINFQMLM  240
SSTSQPPFSS SLRPPPPPLD FIKPMHFLHS HHAGAPPDKN E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02150.13e-44TCP family protein