PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019185141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 140aa MW: 15484.5 Da PI: 8.4509 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 53.6 | 7.1e-17 | 43 | 121 | 2 | 82 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Yn YA++vGFsvrk +++++ +++i +++f C k g++++ ++ + ++ rtgC a ++ dg w vtk XP_019185141.1 43 LYNGYAYRVGFSVRKGQQRYKASTKSIQMKRFFCAKAGYKQKPNSG--VKLYSKIDMRTGCGAFVQFDVGGDGMWTVTKHL 121 7****************************************99887..888999***********************9865 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 140 aa Download sequence |
CVGDSISNDQ AELNIDIDGS SSSPVDEDLV GVVVRNVDEA FELYNGYAYR VGFSVRKGQQ 60 RYKASTKSIQ MKRFFCAKAG YKQKPNSGVK LYSKIDMRTG CGAFVQFDVG GDGMWTVTKH 120 LKEAQSRVMF IWQESSASVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18960.1 | 4e-12 | FAR1 family protein |