PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019184537.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 275aa MW: 31600.8 Da PI: 8.7206

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019184537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.5	9e-52	17	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yL++k++++++++ +i+++d+yk++Pw+Lp+k+ +ekewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v + XP_019184537.1 17 LPPGFRFHPTDEELVVHYLCRKCAAQSISV-PIIADIDLYKFDPWQLPQKALYGEKEWYFFTPRDRKYPNGTRPNRAAGTGYWKATGADKPVGK- 109 79**************************.88***********8777899*********************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + g+kk Lvfy g+ap+g kt+W+mheyrl XP_019184537.1 110 -PKPLGIKKALVFYAGKAPTGIKTNWIMHEYRL 141 .789*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MKSTGGIQDS KQSQLELPPG FRFHPTDEEL VVHYLCRKCA AQSISVPIIA DIDLYKFDPW 60 QLPQKALYGE KEWYFFTPRD RKYPNGTRPN RAAGTGYWKA TGADKPVGKP KPLGIKKALV 120 FYAGKAPTGI KTNWIMHEYR LANVDRTAGK RNNLRLDEWV LCRIYNKKGS VEKYYLNEKE 180 VNFPELEDEK PKITTTRAAL PPVNNQNNSS CCSEQVQSSG YTEVESAPKW DNFMDIGLQT 240 TFPFPSSDHY FNDFNPFQQD MLFMHQPHKS PFNLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	1e-104	NAC family protein