PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184459.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 372aa    MW: 39946 Da    PI: 8.692
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184459.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.17.5e-28176236259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqKe+ gs+fpr+YYrCt++   +Cp+kk+v+r +++p ++++tY+++H ++
  XP_019184459.1 176 EDGYTWRKYGQKEILGSRFPRAYYRCTHQklySCPAKKQVQRLDDNPFMFQVTYRSNHICH 236
                     7****************************9999*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MMSRPNDHLK ISKKQQEMDE NMITTALMMT ILRGIQQAKD LEPNLAHNLA SRRDYIARAC  60
DDIVRVFSSV RERVSSSSPP QVIAPPPLQL GGVLDHTWLS TTAAHDPHLF QPHMVAPLPL  120
PAQPVAAAAA RVHRSGSCGG VPAAQRPRRL SRRDEIDRHT KIVEAPQMGN VDIPPEDGYT  180
WRKYGQKEIL GSRFPRAYYR CTHQKLYSCP AKKQVQRLDD NPFMFQVTYR SNHICHMSAT  240
APSSAPPPLQ PPPTTSSGGA VTGSWLTMDI KPQPPGEAAG TSSGGPFGGG HAVSVSSTSN  300
VPVAAGSGTA GPSTARYDRD VVGGSGGGDY GGQPVVDLVD VMFNYSGSSS NNSMDLIFPS  360
TDQKGDISGE KN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-45WRKY family protein