PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184309.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 304aa    MW: 33817.8 Da    PI: 6.4995
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.86.7e-26128189159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +dDg++WrKYGqK++ +s++pr+Y+rCt++   +C+++k+v+r ++dp +  +tY g+H+++
  XP_019184309.1 128 VDDGHAWRKYGQKVILNSKYPRNYFRCTHKfdqDCQATKQVQRMEDDPPLYRTTYLGKHTCR 189
                     59***************************9999***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MQSPSPENMA GDWKRAIGEL IRGQKLTKQL WDLLKNPPGD DGKPKVADDL LLQILGTFDK  60
SLWILKSSID TADEVSQGGA GAPSSPCYDG RRSEDSSGSC KTFVKDRRGC YKRRKTCESQ  120
IKESPNLVDD GHAWRKYGQK VILNSKYPRN YFRCTHKFDQ DCQATKQVQR MEDDPPLYRT  180
TYLGKHTCRN LQKCPQIFQQ PEDASVILCF GQNSKSDMYT CLPTFSSSIK HENNPHGSRI  240
GSSTSDCFVP SDDRLGSPYD TAGHVAPLSS ASDYGEVISS GGTMDMSQFI GSDVVDDIDD  300
FLII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-43WRKY family protein