PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019184074.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

HSF

Protein Properties

Length: 484aa MW: 54112.7 Da PI: 5.8754

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019184074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.8	5.7e-36	19	109	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d++++e+++wsengnsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+k+ll++ XP_019184074.1 19 FLIKTYDMVDDSATDEIVQWSENGNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEGFLRGQKHLLKN 104 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_019184074.1 105 IHRRK 109 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MDGLAPVPPG GGGGGPAPFL IKTYDMVDDS ATDEIVQWSE NGNSFVVWNP PEFARLLLPT 60 YFKHNNFSSF IRQLNTYGFR KIDPERWEFA NEGFLRGQKH LLKNIHRRKP IHSHSHPPGS 120 TVDPERATYE EEIDKLSREK SNLEANISTF RQQQSTAKQQ LEELTQRVGN MEQRQENLLA 180 CFKKAILNPN FVERLAQKLE SMDFSAYNKK RRLPQAENSQ PVEETTILVD NHSSSRPEFG 240 NLCHQDFSNK LRLELSPAVS DVNLLSHSTQ SSNEDGGSPH RRLSEGWPND LQMRTADVLY 300 APETVELSDT GTSFTLKMDS SLTGKASPRL NSFQHTLTAN EEVDGQMSCH LNLTLASSTL 360 QVDSNPHSAR TPQMGDMIRC SESRSNIDGN VADHSIPQKT RNPSIDNANL SSAHNPSSNK 420 QGSATPPARV NDVFWEQFLT ERPGCSDNEE ASSGLRAGSY DEQEDRRSNQ GIARNTSSMD 480 KLTL

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MDGLAPVPPG GGGGGPAPFL IKTYDMVDDS ATDEIVQWSE NGNSFVVWNP PEFARLLLPT  60
YFKHNNFSSF IRQLNTYGFR KIDPERWEFA NEGFLRGQKH LLKNIHRRKP IHSHSHPPGS  120
TVDPERATYE EEIDKLSREK SNLEANISTF RQQQSTAKQQ LEELTQRVGN MEQRQENLLA  180
CFKKAILNPN FVERLAQKLE SMDFSAYNKK RRLPQAENSQ PVEETTILVD NHSSSRPEFG  240
NLCHQDFSNK LRLELSPAVS DVNLLSHSTQ SSNEDGGSPH RRLSEGWPND LQMRTADVLY  300
APETVELSDT GTSFTLKMDS SLTGKASPRL NSFQHTLTAN EEVDGQMSCH LNLTLASSTL  360
QVDSNPHSAR TPQMGDMIRC SESRSNIDGN VADHSIPQKT RNPSIDNANL SSAHNPSSNK  420
QGSATPPARV NDVFWEQFLT ERPGCSDNEE ASSGLRAGSY DEQEDRRSNQ GIARNTSSMD  480
KLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-169	HSF family protein