PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019183912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 239aa MW: 27336.2 Da PI: 7.0486 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.1 | 4.9e-19 | 31 | 78 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd+ l+++v+ +G g+W+tI+++ g+ R++k+c++rw +yl XP_019183912.1 31 RGFWTPEEDLTLKKCVETHGEGNWATISKKSGLMRSGKSCRLRWKNYL 78 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.3 | 2.3e-15 | 84 | 129 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E +l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_019183912.1 84 RGMMSEDEKDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNFWNTHL 129 6789******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MNPLSDFTIK VEFSEDSNPM KAKEVKAGLK RGFWTPEEDL TLKKCVETHG EGNWATISKK 60 SGLMRSGKSC RLRWKNYLRP NIKRGMMSED EKDLIIRMHK LLGNRWSLIA GRLPGRTDNE 120 VKNFWNTHLN KRSRRGKRMK ITPKDDDSIS ASIPTQSMEN PNLVDGSSKQ EDEMDSIMNS 180 WMEHMGIENC NINSSISTNN LPWIFEDVPL IPILDDVLLD AFQSTGDETL LDGIHPFLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 1e-61 | MYB family protein |