PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019183425.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 209aa MW: 23722.5 Da PI: 7.1642 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 9.5e-18 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W++ ar g++Rt+k+c++rw++yl XP_019183425.1 18 KGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYL 65 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 71 | 114 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ ++++++G++ W++Ia++++ gRt++++k++w++ XP_019183425.1 71 RGNITPEEQLLIMELHAKWGNR-WSKIAKHLP-GRTDNEIKNFWRT 114 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MDKKTCCNSS SYDPEIRKGP WTMEEDLILI NYIANHGEGV WNSLARSAGL KRTGKSCRLR 60 WLNYLRPDVR RGNITPEEQL LIMELHAKWG NRWSKIAKHL PGRTDNEIKN FWRTRIQKHL 120 KQEAATNEST VISGQGSCDK TDQVSSTSAS QLSSIGQGDI YSSPQSSFVC NMEIETGFQG 180 HHFPSHEYSN DAVWGMDDIS WSMQILNGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 1e-81 | MYB family protein |