PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019183373.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 224aa MW: 24574.9 Da PI: 9.0909 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31 | 4.4e-10 | 76 | 118 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 E+ RRdr+N++f eL +l + + +K +K++iL Av+ + +L XP_019183373.1 76 EKLRRDRLNDRFTELSAILEPG---KVPKTDKSAILVDAVRVVTQL 118 9********************9...9***************99888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MVLQENTNWL YDYGFEDISV ADTNFSVSGS GFSWSAQTLN GSSSLSAELD GSKETGSKKR 60 SRAESCAPSS SKACGEKLRR DRLNDRFTEL SAILEPGKVP KTDKSAILVD AVRVVTQLRI 120 EAQKLKASNL NLQEKIKELK AEKIELRDEK QRLKAEKEKL EQQLKTMNAQ PGFMPPAIPA 180 AFAAQGQVSK LVPVISYPGV ATWQFLPPAA VDTSQDHVLR PPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 3e-70 | bHLH family protein |