PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019183310.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 488aa MW: 52771.2 Da PI: 6.6752

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019183310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.3	1.8e-29	284	342	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt++ +Cpv+k+++r+aed +v+++tYegeHnh+ XP_019183310.1 284 SDGCQWRKYGQKMSKGNPCPRAYYRCTMTsTCPVRKQIQRCAEDRSVMIVTYEGEHNHP 342 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDGSPSHHHH LHHPTVILNS LDDPTLPPPP PPAASSFRPE KRVVNELDFF KRENTDFDSA 60 MANEAALVSK GNGRVGDEAV NHPPVLDTGL DLLGSSKKSM VFHGASPATM EHKATVEEER 120 SLYLTALREE LERMNSENQR LKSMLNQVHD KYNALKMHYA YILEHQQTLK PEIPEDDKSG 180 KLDQMNDGFA EGNEKKRKLK DDMKEEHSHS HSSPEGGAGA GASPPCPEDN TREESPDKVQ 240 QKLAGRSNGE NYSDHLPAAA DQPAPAAKKA RVSVRIPCDT PYCSDGCQWR KYGQKMSKGN 300 PCPRAYYRCT MTSTCPVRKQ IQRCAEDRSV MIVTYEGEHN HPLPPAARPM ASTTSAAATM 360 LLSGAARSAD GPGRPVNLDV LPPNFLPTIS TFASVPTITL DLTNPMATQQ TPPPFHSPNP 420 PLPPGIVSAA AAALTRNPSF TAALVSAITS IIGGSHAAAQ PPPNSTDLSD QDVKPSPSME 480 SNVQAKVL

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDGSPSHHHH LHHPTVILNS LDDPTLPPPP PPAASSFRPE KRVVNELDFF KRENTDFDSA  60
MANEAALVSK GNGRVGDEAV NHPPVLDTGL DLLGSSKKSM VFHGASPATM EHKATVEEER  120
SLYLTALREE LERMNSENQR LKSMLNQVHD KYNALKMHYA YILEHQQTLK PEIPEDDKSG  180
KLDQMNDGFA EGNEKKRKLK DDMKEEHSHS HSSPEGGAGA GASPPCPEDN TREESPDKVQ  240
QKLAGRSNGE NYSDHLPAAA DQPAPAAKKA RVSVRIPCDT PYCSDGCQWR KYGQKMSKGN  300
PCPRAYYRCT MTSTCPVRKQ IQRCAEDRSV MIVTYEGEHN HPLPPAARPM ASTTSAAATM  360
LLSGAARSAD GPGRPVNLDV LPPNFLPTIS TFASVPTITL DLTNPMATQQ TPPPFHSPNP  420
PLPPGIVSAA AAALTRNPSF TAALVSAITS IIGGSHAAAQ PPPNSTDLSD QDVKPSPSME  480
SNVQAKVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-54	WRKY family protein