PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183276.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 279aa    MW: 31140.6 Da    PI: 7.9451
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.32.7e-13171272199
                     EEEE-..-H.HHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsd.vlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+kvl+  d  lk++rl +pk++ae++  ++  + ++ +++ d++g++We+ ++   + +s++yvl+ G +++  a++ ++gD+v+F   ++  +
  XP_019183276.1 171 FEKVLSATDtDLKLSRLFIPKTCAETFfpDLCGRHGMPISILDTEGKQWEFFIRCwpNPSSKTYVLE-GLRDYIIAKKWQAGDIVTFC--QTkPG 262
                     67777655515677**********999**444456788***************87355556669999.********************..45499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     ++l+++++++
  XP_019183276.1 263 GKLMMGLRKT 272
                     9999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MASSSRKTCL QCQASSSSSN SDGFRNGWRL RSGEFAQLCR RCASAYDEGK FCETFHSNDD  60
GWRDCEACGK LVHCGCIVSF NTYLLLDFGG IMCIECSKIS FILEHFLFLQ AYPPNSARNR  120
CMYPASPLPF GDPQQDPSRK NQKESQYCPH ANGSELQQIC TIPGSIVTPL FEKVLSATDT  180
DLKLSRLFIP KTCAETFFPD LCGRHGMPIS ILDTEGKQWE FFIRCWPNPS SKTYVLEGLR  240
DYIIAKKWQA GDIVTFCQTK PGGKLMMGLR KTSTGSASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.14e-32B3 family protein