PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019183198.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 697aa MW: 75589.1 Da PI: 6.1839

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019183198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.3	2.8e-32	305	362	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_019183198.1 305 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSH-EGHITEIIYKGAHNHQK 362 8**************************************.*************85 PP
2	WRKY	103.8	9.5e-33	492	550	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_019183198.1 492 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 550 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 697 aa Download sequence
MAGFGDHMPI MGDWVPPSPS PRAFFSSFLG DDDVGSRSNA EPTSENKSQP LLPDPKEYAN 60 SDSKNGAQGD QTAKLSSLSE RNNMNSHGGL LERMAARAGF SIPKLKTDSI RPPALVQNQE 120 LRSPYFTIPP GLSPTTLLDS PVFLSNSLVQ SSPTTGKFAF PLIGDSLNSA LFMGASDNNN 180 GTSSFAFKPV IETETGPSLF PETIGKVPPS SLSWQPVPGI EVSVHSEKNP LVHQRVEPTL 240 VHTQSGTVFS RSYTEGGSNI TSEPRTFQTV AGSMEQSPPP DEQQDEDIDQ RGGGDPNAVG 300 APADDDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSHEGHIT EIIYKGAHNH 360 QKPPPNRRAA FGSENAEQDG TIGIGDPTWE NVQNGSGARA PDWGNDNLEV TSSGTQFESR 420 DPVEGSSPFS NEEDEDDRGT HGSVSIGYEG EGDEYDSKRR KIETYATDMS GATRAIREPR 480 VVVQTTSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTS AGCTVRKHVE RASHDLKSVI 540 TTYEGKHNHD VPAARNSTHP NSGASSNLPS QTTATQGHVH RPEPSQLQNT MSQFARPPSL 600 GSFGFPGGPQ LAHTLGFGFG MNQQGLANLA MAGLGPNQGK FPVPQVHSYL GQQRSMNDMR 660 PKAEPKMEPG SDPGMNLSSD SSVYQQFTSR LPLGPQM

Sequence ? help Back to Top

Protein Sequence Length: 697 aa Download sequence

MAGFGDHMPI MGDWVPPSPS PRAFFSSFLG DDDVGSRSNA EPTSENKSQP LLPDPKEYAN  60
SDSKNGAQGD QTAKLSSLSE RNNMNSHGGL LERMAARAGF SIPKLKTDSI RPPALVQNQE  120
LRSPYFTIPP GLSPTTLLDS PVFLSNSLVQ SSPTTGKFAF PLIGDSLNSA LFMGASDNNN  180
GTSSFAFKPV IETETGPSLF PETIGKVPPS SLSWQPVPGI EVSVHSEKNP LVHQRVEPTL  240
VHTQSGTVFS RSYTEGGSNI TSEPRTFQTV AGSMEQSPPP DEQQDEDIDQ RGGGDPNAVG  300
APADDDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSHEGHIT EIIYKGAHNH  360
QKPPPNRRAA FGSENAEQDG TIGIGDPTWE NVQNGSGARA PDWGNDNLEV TSSGTQFESR  420
DPVEGSSPFS NEEDEDDRGT HGSVSIGYEG EGDEYDSKRR KIETYATDMS GATRAIREPR  480
VVVQTTSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTS AGCTVRKHVE RASHDLKSVI  540
TTYEGKHNHD VPAARNSTHP NSGASSNLPS QTTATQGHVH RPEPSQLQNT MSQFARPPSL  600
GSFGFPGGPQ LAHTLGFGFG MNQQGLANLA MAGLGPNQGK FPVPQVHSYL GQQRSMNDMR  660
PKAEPKMEPG SDPGMNLSSD SSVYQQFTSR LPLGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-160	WRKY family protein