PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182843.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 260aa    MW: 28111 Da    PI: 8.5717
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.5e-1355101354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN  +++Lr+llP+       K +Ka+ L +Av+++++L
  XP_019182843.1  55 KSHSEAERRRRKRINGHLATLRTLLPNT-----IKTDKASLLAEAVKCVREL 101
                     69*************************8.....6**************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MQTFPSFYEV GSCSESYNNF LQGIMGSAEM MNSLEDTSCV SPRSLAEAKA IAANKSHSEA  60
ERRRRKRING HLATLRTLLP NTIKTDKASL LAEAVKCVRE LKKTTTELAA VPESDADDNS  120
FSYAAAAGTS GGGDVRRPTK YMFPSETDEL KLSYAGEAGG GNLKAALCCE DRPEIITELV  180
RALKSVEGKV VRAEMATVGG RIKCVLWVHV EGLNGGNKGG EEVVAAVRRA LKVVVDRSNA  240
VVNSSLQELP GHKRPRLYQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-34bHLH family protein