PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182784.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family BES1
Protein Properties Length: 318aa    MW: 34502.8 Da    PI: 9.2963
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822215.61.2e-6671521150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     g+sgr ptwkErEnnkrRERrRRaiaaki+aGLRaqGnyklpk++DnneVlkALc+eAGwvv +DGttyrkg +p+  +e++g sa++s +ss+q
  XP_019182784.1   7 GSSGRLPTWKERENNKRRERRRRAIAAKIFAGLRAQGNYKLPKHCDNNEVLKALCAEAGWVVGEDGTTYRKGHRPP-PTETMGVSANISACSSVQ 100
                     689*************************************************************************.9***************** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsssl 150
                      s+ ss ++sp++sy+asp sssfpsps+ d ++    + +lp++++l++v+ssl
  XP_019182784.1 101 PSPMSSCFPSPAPSYHASPVSSSFPSPSRGDANPP---SYILPFIHNLASVQSSL 152
                     ********************************987...59********9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MTAPGEGSSG RLPTWKEREN NKRRERRRRA IAAKIFAGLR AQGNYKLPKH CDNNEVLKAL  60
CAEAGWVVGE DGTTYRKGHR PPPTETMGVS ANISACSSVQ PSPMSSCFPS PAPSYHASPV  120
SSSFPSPSRG DANPPSYILP FIHNLASVQS SLPPLRISNS APVTPPLSSP TKSSKRKPFL  180
ESLSNSSFYP SHHALFISSA PSSPTRRQHC KPATIPECDE SDASTIDSVR WVSSQTGIPL  240
VAPTSPTFNL VQPFSQQTTP LIGVNVHRDF DWAGAAKRTR CSEFDFENAK VMAWEGERIH  300
DIGMDDLELK LGSGKAHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.52e-77BES1 family protein