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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_019182782.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family | bHLH | ||||||||
| Protein Properties | Length: 279aa MW: 31421.1 Da PI: 7.8699 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 34.7 | 3.3e-11 | 116 | 159 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+ ++++ Lr+++Pk + K++ +i+ A++YIk+L
XP_019182782.1 116 LMAERRRRKRLHDRLSMLRSIVPKiS------KMDRTSIVADAIDYIKDL 159
589*********************66......****************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 279 aa Download sequence |
MEVSRHGLLE ELIAPLNTNE LFPIGWISST FESSLAAPDF LLSSNSSLED DDDDSTFACP 60 LADIFKKPRT PPPPPVEEVH GREARQVLVT GFEGAKEEKK KKRKKKGAEG QPSKNLMAER 120 RRRKRLHDRL SMLRSIVPKI SKMDRTSIVA DAIDYIKDLL HKINQLREVS ENPTGFKPPP 180 HELTNPTCSP KFDVERRHED TRIEIRCATR PGLMLSTVST LEAIGLDIQH CVTGCFTTDF 240 SFQASCIEAM EHPTVVRRPE DIKQVLFKTA GYGGMKMLI |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 99 | 104 | KKKKRK |
| 2 | 99 | 105 | KKKKRKK |
| 3 | 99 | 106 | KKKKRKKK |
| 4 | 99 | 123 | KKKKRKKKGAEGQPSKNLMAERRRR |
| 5 | 100 | 106 | KKKKRKK |
| 6 | 100 | 124 | KKKKRKKKGAEGQPSKNLMAERRRR |
| 7 | 101 | 125 | KKKKRKKKGAEGQPSKNLMAERRRR |
| 8 | 101 | 105 | KKRKK |
| 9 | 102 | 126 | KKKKRKKKGAEGQPSKNLMAERRRR |
| 10 | 103 | 127 | KKKKRKKKGAEGQPSKNLMAERRRR |
| 11 | 104 | 128 | KKKKRKKKGAEGQPSKNLMAERRRR |
| 12 | 119 | 126 | ERRRRKRL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G65640.1 | 8e-56 | bHLH family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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