PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019182611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 232aa MW: 25364.2 Da PI: 9.3861 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.4 | 1.2e-08 | 120 | 160 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +Av+Y+k L XP_019182611.1 120 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 160 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MDVNLMKSSS ENEMEIMTLL TMRPNNPPHQ PLDDNLGFSI HNPYGGATLS FSGVEQHPVG 60 AAAADPPRHK SSSNGGSMEA MREMIFRIAM MQPIHIDPES VKPPRRKNVK ISKDPQSVAA 120 RHRRERISEK IRILQRLVPG GTKMDTASML DEAVHYVKFL KKQLEYLEAA ASGPTTIAAA 180 APGFPTTMSP TLLDMNMNMN LMNYYSSSSS SGSMKAACQA VPSMGSNLQM LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 2e-47 | bHLH family protein |