PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019181943.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 316aa MW: 34689.3 Da PI: 6.3727

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019181943.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	54.5	2.5e-17	120	174	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr++r+++NRe+ArrsR+RK+++++eLe+ v++L +eN +L k+l ++++ XP_019181943.1 120 DVKRTKRMASNRESARRSRRRKQEQLAELENQVDQLRGENASLFKQLAGAAQQYK 174 78*****************************************988877777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MKKSPSEQAL AELFWGKNGG DKDISIAHFH HHPSLLLINQ DVMHGLSSLN PLNDHVNFWS 60 KKTTPSHAGI VGPGDAQSST CDITKNTGAT SGSSHELWED DDMDAEEGGA CEQSVVNNND 120 VKRTKRMASN RESARRSRRR KQEQLAELEN QVDQLRGENA SLFKQLAGAA QQYKDSSTNN 180 RVLKSDVEAL RAKVKLAEDM VGRGSVNSSL SHLIQNYLTA PRTTLGINNV CRLDNMSSTM 240 ISVPELEGHA HDYSPSLLQR VAIQGPTSTM ELHNNVDSYT DSNLKNNNNN NNNNNNNGVI 300 SEVVSCVIDM WSPLAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	142	RRSRRRKQ
2	137	142	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	1e-32	bZIP family protein