PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019181616.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 343aa MW: 39080.6 Da PI: 7.0957

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019181616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.4	1.2e-52	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+el+ +yLk+k+eg ++el evi+ vd+yk++Pw+Lp k + +++ ew+fF++rdkky++g+r+nratksgyWkatgkd++v+ XP_019181616.1 6 LPPGFRFHPTDDELIGYYLKRKTEGLEIEL-EVIPVVDLYKFDPWELPeKsFLPNRDMEWFFFCPRDKKYPNGSRTNRATKSGYWKATGKDRKVV 99 79**************************.99**********95334556888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k ++vg +ktLvfy+grap g ++dWvmheyr+ XP_019181616.1 100 C-KPSTVGYRKTLVFYRGRAPLGDRSDWVMHEYRI 133 .8889**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MRGASLPPGF RFHPTDDELI GYYLKRKTEG LEIELEVIPV VDLYKFDPWE LPEKSFLPNR 60 DMEWFFFCPR DKKYPNGSRT NRATKSGYWK ATGKDRKVVC KPSTVGYRKT LVFYRGRAPL 120 GDRSDWVMHE YRISDYDSQG NPIFQGPFVL CRVIKRNDVS LKTINARGET SEKVRCNSSN 180 NGDISSVPDE PIVISGNVPT QTTYKTTESN YSIPVPSSPY KTSRLGDYEF HVHPSSSSLL 240 ISPDMILNSS KDYRHQGQHT FGYYPQYGFS NPTLWQPYEN PELSSSSSYS SIRAEVELSD 300 DLTRYACTSA YSALGSYIGF YGSEDASDQG YDQSILLRNP NLF

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MRGASLPPGF RFHPTDDELI GYYLKRKTEG LEIELEVIPV VDLYKFDPWE LPEKSFLPNR  60
DMEWFFFCPR DKKYPNGSRT NRATKSGYWK ATGKDRKVVC KPSTVGYRKT LVFYRGRAPL  120
GDRSDWVMHE YRISDYDSQG NPIFQGPFVL CRVIKRNDVS LKTINARGET SEKVRCNSSN  180
NGDISSVPDE PIVISGNVPT QTTYKTTESN YSIPVPSSPY KTSRLGDYEF HVHPSSSSLL  240
ISPDMILNSS KDYRHQGQHT FGYYPQYGFS NPTLWQPYEN PELSSSSSYS SIRAEVELSD  300
DLTRYACTSA YSALGSYIGF YGSEDASDQG YDQSILLRNP NLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-96	NAC family protein