PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019181081.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 390aa MW: 43220.3 Da PI: 4.206 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 117 | 165 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 + +GVr++k +g+W+AeIrd + + +r++lg++ +aeeA +a+++ r+++e XP_019181081.1 117 KLRGVRQRK-WGKWAAEIRDpF-----KgRRVWLGTYNSAEEASRAYERKRLEFE 165 679*****9.**********55.....45**********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MAEPQRQPLS NQKSFCKKLK PRAEPMKPMR RVRIVCDDPD ATDSSDDEGV VDVKRPKLFV 60 REIHLPSADP FSCPAKAPET ESSCQDSNNG EKDKNPPTKK KVLAKTLGQP QAASSVKLRG 120 VRQRKWGKWA AEIRDPFKGR RVWLGTYNSA EEASRAYERK RLEFEAMCKN NMKSLDNDSN 180 DNSHSHSLAI SKPQDLDMTV AYSALEEESA ESLASHTSQP SPSSVLEVTS LASASKFVVE 240 ANGCEQNAPE LGVMEDENPA MPQIDDEMEK GPELGVMDDE TLVVAEIGQS MEKVPDLGVM 300 DESLSLAEGI EFDMELPLLA GNDFRQCLDD FVLGDFEDIP MYGFEGDEQL PATLPDFDFD 360 LDFDFEGCND TWMDDAPMMT GTTSLNIACL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25890.1 | 1e-22 | ERF family protein |