PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180865.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 249aa    MW: 27054.5 Da    PI: 5.5447
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.8e-204695255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a++ a++k++g
  XP_019180865.1 46 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAALAYDDAALKFKG 95
                    7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDAPPEKTHD FDSYSSAATD TGIVTSASPS PTAAQPVQEQ GNVRRHYRGV RQRPWGKWAA  60
EIRDPKKAAR VWLGTFDTAE DAALAYDDAA LKFKGSKAKL NFPERVQGKT ELRYVSTGGG  120
GSHNAAGGGG GASSAVDHYI PGHHQLPVSA TMTPPEAYPY LQQYAQLLSS SDAEFPYLTS  180
ALYNNQASLM QPSSLPPQAT AAFPPPTAPS QQDYFPYFPS QFENFPSSDY QHYYSKGFDD  240
PNNPNPNDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-31ERF family protein