PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019180767.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 28257 Da PI: 9.224 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.5 | 7.4e-19 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd llv++v+ +G g+W+++ar g++R +k+c++rw +yl XP_019180767.1 17 KGPWTAEEDRLLVEYVRFHGEGRWNSVARFAGLKRNGKSCRLRWVNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.8e-17 | 70 | 114 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ ++vd+++++G++ W+tIar ++ gRt++++k++w+++ XP_019180767.1 70 RGQITPHEERIIVDLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 114 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MMGTEQMGWG IMAGWRKGPW TAEEDRLLVE YVRFHGEGRW NSVARFAGLK RNGKSCRLRW 60 VNYLRPDLKR GQITPHEERI IVDLHARWGN RWSTIARSLP GRTDNEIKNY WRTHFKKKAA 120 ANSSDHPKPR ILRQQQQQQK KKQEESNHQI DMRKMMSSFE EIDENRLSSV PQPQIAAGLL 180 SDQEQQGFLS SMIHGCAEVP EPSSSTEDII MCDGLWNLDD FHGSFSPMAS ANKACFLQPV 240 AAPFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 1e-80 | MYB family protein |