PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180316.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 231aa    MW: 24397.2 Da    PI: 6.1008
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-182777155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  XP_019180316.1 27 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 77
                    59*****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVKTADQQKM MGSSSSSGNA AAAAMKKKYK GVRMRSWGSW VSEIRAPNQK TRIWLGSYST  60
PEAAARAYDA ALLCLKGASA SANLNFPLDH SYHIPPSGAV LSPKSIQRIA AAAAAANGGG  120
GAIPISAAAS PPSGFASYSP SSSCSASSSS PLSETAGIED EDYFPCIDAN NNAPPAHHQD  180
PAVAAIMAQC SWYNFDSPKY NDMLMNGGFF DPPLVEDVYE EFGEIRLWNF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-22ERF family protein