PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019180233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 315aa MW: 32888.3 Da PI: 4.5214 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.1e-19 | 32 | 82 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y GVr+++ +gr++AeIrdp++ + r++lg+f+taeeAa a+++a+++++g XP_019180233.1 32 CRYLGVRRRP-WGRYAAEIRDPNT---KERHWLGTFDTAEEAALAYDRAARSMRG 82 6899******.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MTTNKTKSSS SSSGKTRKSA SGSGQQAEPS GCRYLGVRRR PWGRYAAEIR DPNTKERHWL 60 GTFDTAEEAA LAYDRAARSM RGKSRARTNF VYSDMPPGSS VTSIISPDEP QYAVYNNDFP 120 HFPGGLFSSA PGQNGEQHYQ SGGNGNHTGG ADQFLFFGGD QSGGGGALLD TGGLNGGCEF 180 FQDYYCGSSN GNGVDESNAA MAMAAELPPL PPDITTSCSG GYFGSGFGGE ATSSGDNNAA 240 YTTVMGGSGD GGVSASAGWD FYGYGGGSSE MAMQQPQAPP ELQMSYGSSE SDGINMFTAN 300 SYTFSSSNNY GGYWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 3e-33 | ERF family protein |