PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180129.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 345aa    MW: 38021.4 Da    PI: 6.9569
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1054e-33176234159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s+fprsYYrCt++ C vkk+vers+edp++v++tYeg+H h+
  XP_019180129.1 176 LDDGYRWRKYGQKAVKNSPFPRSYYRCTTPACGVKKRVERSSEDPSTVVTTYEGTHGHP 234
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MLLIIKSMEN KAAERSKTEN NNNPMVNPAF SDQIPATFSL QTLFDIPSSD QTDHPKNPPS  60
SSFFDYLFPS QDYSATVFDL LQTPPPLLIP PPPPPPSQPL PESSEAVNTP ATPNSSSISS  120
SSNEAAIDDQ LPKTTAEEVE QESDRSKKQL KPKRKNQKRE REPRVAFMTK SEVDHLDDGY  180
RWRKYGQKAV KNSPFPRSYY RCTTPACGVK KRVERSSEDP STVVTTYEGT HGHPCPVTPR  240
ATVGIIMPEA SNFGSVSAPG GGTGSPSSSS FVIPHHHFHY PMPQQQQPFF AITSPLPPPL  300
SYTPSTGNQE RRFAVPSSSS PAARDDGLLQ DMLPFRLRKE PGSEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.15e-45WRKY family protein