PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019180082.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 391aa MW: 42861.9 Da PI: 6.2565

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019180082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.1e-32	237	292	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_019180082.1 237 KQRRCWSPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 292 79****************************************************97 PP
2	Myb_DNA-binding	43.7	6.2e-14	239	290	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ XP_019180082.1 239 RRCWSPELHRRFLQALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 290 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MLITIHDPAA STNYPEKMRR CQEYIEALEE ERRKIQVFQR ELPLCLELVT QAIEAYKQQL 60 SGTTTECNLN IGQSECSEQT TSSDDDEGPV LEEFIPLKRA SSLSQDEEDD EQQSPKSANH 120 RTDDDDDDDN NNNGDSSDSS KDGKVSKKQD WLRSAQLWNQ SFTDPTPKEE SPSNCKVGVK 180 RNGSGGAFHP FKREKSAGTS SPAVQTLDST TAGVGNGSGG GGGGSKKEEK ETQSQRKQRR 240 CWSPELHRRF LQALQQLGGS HVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTRRPTPSI 300 RNNGSQQQGP QFVVVGGIWV PPPEYAAAMA PPPTSGEAAT SNGIYAPVAT TPKQTQQNRT 360 IPFSGEKGGA RRSDSPSTSY STHTTTTSHS S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MLITIHDPAA STNYPEKMRR CQEYIEALEE ERRKIQVFQR ELPLCLELVT QAIEAYKQQL  60
SGTTTECNLN IGQSECSEQT TSSDDDEGPV LEEFIPLKRA SSLSQDEEDD EQQSPKSANH  120
RTDDDDDDDN NNNGDSSDSS KDGKVSKKQD WLRSAQLWNQ SFTDPTPKEE SPSNCKVGVK  180
RNGSGGAFHP FKREKSAGTS SPAVQTLDST TAGVGNGSGG GGGGSKKEEK ETQSQRKQRR  240
CWSPELHRRF LQALQQLGGS HVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTRRPTPSI  300
RNNGSQQQGP QFVVVGGIWV PPPEYAAAMA PPPTSGEAAT SNGIYAPVAT TPKQTQQNRT  360
IPFSGEKGGA RRSDSPSTSY STHTTTTSHS S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-91	G2-like family protein