PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019179953.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

CPP

Protein Properties

Length: 476aa MW: 52218.2 Da PI: 7.9745

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019179953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.9	2.3e-14	28	68	1	42
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 k+kk+CnCk+s+Clk+YCeCfa+g C+ C+C +C+N+ e+ XP_019179953.1 28 KKKKQCNCKHSRCLKLYCECFASGIDCDG-CNCVNCHNNVEN 68 589************************.******9875 PP
2	TCR	51.3	2.3e-16	112	150	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN XP_019179953.1 112 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNF 150 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MCMVAWKPES PRARSRQNAS EVIDGTPKKK KQCNCKHSRC LKLYCECFAS GIDCDGCNCV 60 NCHNNVENEA AKREAVEATL ERNPNAFRPK IASSPHGVRD KDKARDGLIL GKHNKGCHCK 120 KSGCLKKYCE CFQANILCSE NCKCMDCKNF DGSEERRALF HGDHANNVAY LQQAANAAIT 180 GAIGASGYGS PPVNKKRKGQ ELYFGSMTKN PVHELGQFLQ PNHIKSFVPP SKVSSIPSAH 240 VGNAAALGHS KFTYRSLLAD VIQPLDLKDL CSVLVYCSRE AAKVLADEKE AREKQAQEWK 300 ETSLASSSQE QFENKKDSVE KPLHDDCSSL DHVEKPSPDD PNLDGSDVSK RRPMSPGTLA 360 LMCDEQETMF VAASPTELSN LGCKTASQSL HGQGVTEVYA EQERVVLTKF RDCLNKLITM 420 GEIKETKCSS MARASVSAYQ KDVICNGTAV AETLNQQVPH TNGVVTKSAI QPFQHQ

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MCMVAWKPES PRARSRQNAS EVIDGTPKKK KQCNCKHSRC LKLYCECFAS GIDCDGCNCV  60
NCHNNVENEA AKREAVEATL ERNPNAFRPK IASSPHGVRD KDKARDGLIL GKHNKGCHCK  120
KSGCLKKYCE CFQANILCSE NCKCMDCKNF DGSEERRALF HGDHANNVAY LQQAANAAIT  180
GAIGASGYGS PPVNKKRKGQ ELYFGSMTKN PVHELGQFLQ PNHIKSFVPP SKVSSIPSAH  240
VGNAAALGHS KFTYRSLLAD VIQPLDLKDL CSVLVYCSRE AAKVLADEKE AREKQAQEWK  300
ETSLASSSQE QFENKKDSVE KPLHDDCSSL DHVEKPSPDD PNLDGSDVSK RRPMSPGTLA  360
LMCDEQETMF VAASPTELSN LGCKTASQSL HGQGVTEVYA EQERVVLTKF RDCLNKLITM  420
GEIKETKCSS MARASVSAYQ KDVICNGTAV AETLNQQVPH TNGVVTKSAI QPFQHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-154	CPP family protein