PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179825.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 263aa    MW: 28411.2 Da    PI: 5.1963
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.7e-1662111255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y GVr +  +g+Wv+eIr+p++   + r++lg+f +ae+Aa+a++ a+++ +g
  XP_019179825.1  62 TYVGVRMRA-WGKWVSEIREPKK---KSRIWLGTFASAEMAARAHDVAALSVKG 111
                     599***998.**********854...6**********************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MAAESSSSHS ETESISSYSS LSPSSSSGAA DRLKKRGRGD GGDGGDNGGK RSRGRSDLKH  60
PTYVGVRMRA WGKWVSEIRE PKKKSRIWLG TFASAEMAAR AHDVAALSVK GKSAVLNFPE  120
LSDLLPRPAT SAPRDIQAAA LRAAHMDHLD PPPKPETPEP SLSAASCSSS SSSAEAPSSQ  180
EEQLGEIVEL PKLPDPSYDL VESTRDEFLF IDSEVWDYFH PWWHSLEDDY GHYGGGGGGG  240
INIEISEFES TVSGHFESLL WQH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13136DRLKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-51ERF family protein