PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179783.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 150aa    MW: 17131 Da    PI: 4.8184
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB169.93e-5317112297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdr +Pianv+rimkk+lPanak+skdaket+qecvsefi+fvt+eas+kc++e+rkt+ngdd++wa+a lGf+dy+ plk yl++yre ege
  XP_019179783.1  17 REQDRWVPIANVGRIMKKTLPANAKVSKDAKETMQECVSEFIGFVTGEASEKCRKERRKTVNGDDICWAMAALGFDDYAPPLKRYLQRYREQEGE 111
                     89*******************************************************************************************99 PP

           NF-YB  97 k 97 
                     +
  XP_019179783.1 112 Q 112
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MEMGEKSGAA NEEESFREQD RWVPIANVGR IMKKTLPANA KVSKDAKETM QECVSEFIGF  60
VTGEASEKCR KERRKTVNGD DICWAMAALG FDDYAPPLKR YLQRYREQEG EQRANQERGI  120
SNEEVEADNT INNQFQEPSS SSSFHTKTPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.13e-57NF-YB family protein