PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179543.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GRAS
Protein Properties Length: 657aa    MW: 72921.2 Da    PI: 6.1298
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS404.98e-1242706421374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaalklfsevsPil 91 
                     l++lL++c+eav  ++++++++++ rl elasp+g p+ Rl+ayfteALa r+a ++++++++ pp++ ++        ++ +al+l+++v+Pi+
  XP_019179543.1 270 LITLLVACVEAVGLKNFAAVNHCIGRLGELASPRGLPVSRLTAYFTEALALRVAWHWPHIFHITPPRDLDRPGglddDHNNGTALRLLNQVTPIP 364
                     5789**************************************************************999876666556777789999******** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                     kf ++t N+ +l+ ++g++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+g+    sk+el etg+rLa fAe+l++ fef++ v++rl
  XP_019179543.1 365 KFIQFTSNEILLRVFQGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPSHIRITGIGE----SKQELLETGDRLAGFAEQLNLAFEFHP-VVDRL 454
                     **********************************************************....9**************************.7**** PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     ed++l++L+vk+gE++aVn++lq+h++l ++   +    ++L l++s++P  vv++eqea+h+++s+  r++++l+yysa+fdsl+++lp +s  
  XP_019179543.1 455 EDVRLWMLHVKEGESVAVNCMLQMHKVLYDTSGRAL--VDFLGLIRSTNPIAVVMAEQEAEHDESSLESRLVNSLKYYSAVFDSLDSTLPLDSPV 547
                     ****************************77766655..89******************************************************* PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaG.Fkpvplsekaakqaklllrkvksdgyrveee..sgslvlgWkdrpLvsvSaW 373
                     r+k+E++ ++rei+n++aceg+er erh +++kWr+ l+e G F+ v ++e++  q ++ll++++++ y+ve++  ++ l+l W+d+pL++vSaW
  XP_019179543.1 548 RTKIEEM-FAREIRNIIACEGRERLERHASFGKWRKLLMEQGkFRCVGITERELLQSQMLLKMHSMESYKVEKQgeDDGLTLSWEDQPLYTVSAW 641
                     *******.****************************9777666*****************************7666999**************** PP

            GRAS 374 r 374
                     +
  XP_019179543.1 642 T 642
                     6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    
MLAGCSSSTL VSPRHRLRSE ASEQFQACHF PAIMSTQRLD LPCNFIRKES SRAQSVRPVG  60
LSVEKPGGEA KTSGCGLKQN IRLPPTPTAI QTPRFEGKRE SWEWEKKSRC LKRSCDEGFV  120
SRANKRKKGC GEEEEEDEKE EEEKGHHGLS LGHHSGGFWF QSGVVGGEEE SVCFVPSEVR  180
PWLDSVVTEI TDFSDKNVVE TSQGGGKEAS GSSTSSEGGR GGGRGLLLRP PPTSSDYEIG  240
NGSRRPNPNN TAASQAAVAG ETEPNNGVEL ITLLVACVEA VGLKNFAAVN HCIGRLGELA  300
SPRGLPVSRL TAYFTEALAL RVAWHWPHIF HITPPRDLDR PGGLDDDHNN GTALRLLNQV  360
TPIPKFIQFT SNEILLRVFQ GKDRVHIIDF DIKQGLQWPS LFQSLASRAN PPSHIRITGI  420
GESKQELLET GDRLAGFAEQ LNLAFEFHPV VDRLEDVRLW MLHVKEGESV AVNCMLQMHK  480
VLYDTSGRAL VDFLGLIRST NPIAVVMAEQ EAEHDESSLE SRLVNSLKYY SAVFDSLDST  540
LPLDSPVRTK IEEMFAREIR NIIACEGRER LERHASFGKW RKLLMEQGKF RCVGITEREL  600
LQSQMLLKMH SMESYKVEKQ GEDDGLTLSW EDQPLYTVSA WTPFDIAGSS SSYSQPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein