PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179501.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 248aa    MW: 27945.5 Da    PI: 8.9151
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.32.8e-32171229159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  XP_019179501.1 171 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHS 229
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MSSSSTTSQA MLNQILFHQD VASSSSSLFC VSSNNNIINT AGTALPFESL KTLITPMPTS  60
LASLLPPLVE SSSANSSAFH QTLVEEDLSP LFGPPHHHQL LSLHRSAPNL WAWGEVNECM  120
MRSKRSSGLV VDDHHHHLGV SAVKMKKMSK SRRKVREPRF SFKTMSDVDV LDDGYKWRKY  180
GQKVVKNTQH PRSYYRCTQD NCRVKKRVER LAEDPRMVIT TYEGRHVHSP SHDDDDSQAS  240
SQANDLLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.13e-44WRKY family protein