PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019179365.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 109aa MW: 12262 Da PI: 10.1289

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019179365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.8	4.7e-38	30	91	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +++alkcprCdstntkfCyynnyslsqPryfCk+C ryWt GG+lr vPvGgg+r++k+sss XP_019179365.1 30 EQSALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCFRYWTIGGTLRTVPVGGGCRRKKRSSS 91 57899*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 109 aa Download sequence
MASAQTLESM LVCRKAEQQE KKAKAACADE QSALKCPRCD STNTKFCYYN NYSLSQPRYF 60 CKSCFRYWTI GGTLRTVPVG GGCRRKKRSS SRAARTNQDP LLSSLTSRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-31	Dof family protein