PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019178941.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YA | ||||||||
Protein Properties | Length: 200aa MW: 22218.5 Da PI: 7.3431 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 100.8 | 1.3e-31 | 105 | 161 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+e+kl +++rkpylheSRh hAlrR+Rg+gG+F XP_019178941.1 105 EEPVFVNAKQYHGILRRRQSRAKAESENKL-HRNRKPYLHESRHLHALRRARGCGGQF 161 69****************************.*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MTSSDHDLSD NSETGQHENQ SSPPSQVMPH PGTVAPMPSG ILPQLGNGNA MAQTGYPYPD 60 PYYRSIFAPY DTQPYPQHFP AQSMVNLQLM GVQQAGVPLP SDAVEEPVFV NAKQYHGILR 120 RRQSRAKAES ENKLHRNRKP YLHESRHLHA LRRARGCGGQ FLTSKKSDEN QQKKEELCDK 180 SQPTGNHNSE NCDVASENGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 7e-66 | NF-YA family protein |