PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019178749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 349aa MW: 39699.3 Da PI: 9.3557 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.7 | 2.2e-18 | 142 | 232 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v + +l lp +f+e+h +++++++lede+g +++ +i ++++ l++GW+ F+ +++L++gD +vF l++ ++f +v XP_019178749.1 142 FVKSMVRSHVYSCFWLGLPTRFCEDHLP--KSTVDIVLEDEEGAEYDAVYISKRTG----LSGGWRAFALDHKLDDGDALVFDLVEPTKF--KVY 228 89************************53..3789****************544444....***********************9876666..888 PP EE-S CS B3 96 vfrk 99 ++r+ XP_019178749.1 229 IVRA 232 8876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MANDNSANSY EEARKQRVLD NKKRFEDLGI LKISKSLSDL AKSEKKSPAK QLKVRHKPNE 60 AYMLEPRRSS RARNPAPSYR DDVKIDVELP SFRKRSKLGS SWASYLARPI EEVKTASYEE 120 RSKALKEAEK LQSNLQSENP SFVKSMVRSH VYSCFWLGLP TRFCEDHLPK STVDIVLEDE 180 EGAEYDAVYI SKRTGLSGGW RAFALDHKLD DGDALVFDLV EPTKFKVYIV RASHCSSQGD 240 ETDAREEESG GEETKNETAI RRKKRDAQSR DSTKSQEEVP SVVEETKNET TKPRKRRNTQ 300 SRDSIKPQKE IPTIAEETKE ATQSKDSTTL QKEASATRRS ARLLSCRSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 2e-67 | B3 family protein |