PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178589.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 333aa    MW: 36281.3 Da    PI: 6.6787
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.15.3e-30156209155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_019178589.1 156 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 209
                     59*******************.********************************8 PP
2Myb_DNA-binding48.32.4e-15158208148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
   XP_019178589.1 158 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 208
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGEEVKIGYY GGAGAGAGAG DEDRLMEWEE GLPSIDDLTP LSQALIPPEL ATAFRICPEP  60
TRTMLDVNRA SQSTFSSLRG GQSQTLSSSN NFNFKPFNEE RNREQMVVED DVDPTREGSD  120
SRKMRRIESC GGAEEADSAV RNENCGDDPS AKTLKRPRLV WTPQLHKRFV DVVAHLGIKN  180
AVPKTIMQLM NVEGLTRENV ASHLQKYRLY LKRMQGLSNE GPSSSDHLFA STPVPQSLHE  240
SGGSGYGHGN GHGNGHSHGN GHSHNSNGYM AMPYPPQMMP MPMIGMAAHG GLPVGNPNGG  300
PSNGFHHQYG LMQQRDWSGN RYGAYNHVAP TDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.27e-84G2-like family protein