PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178403.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 210aa    MW: 24335.7 Da    PI: 9.1486
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.71.8e-2745133189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +fY++YA+++GF +r+++ ++s+ +++i +r++ C+k+g+  + k++   +r++r++tr gCka++ vk +k+gkw+vt++++eH+H+l
  XP_019178403.1  45 EFYDNYARRAGFVMRIDQCRRSEVDKRILSRRLSCNKQGYYVKMKDQFGPARKPRTSTREGCKAMMLVKVDKSGKWVVTRFVKEHTHPL 133
                     6*****************************************999999***************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDIEVEAAIG DSSASAERRL DSGEESRVQE PVVGMEFESE DAAKEFYDNY ARRAGFVMRI  60
DQCRRSEVDK RILSRRLSCN KQGYYVKMKD QFGPARKPRT STREGCKAMM LVKVDKSGKW  120
VVTRFVKEHT HPLIVSGRPS RNAMDHKDRR IHELTMELNR QDRLCELYRD QLNTLLKYIE  180
EQIEVVSGKV QVVVSNVNQV EKEARKPPNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.18e-68FAR1 family protein