PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019178330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 458aa MW: 49992 Da PI: 7.9229 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.6e-18 | 135 | 181 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd ll+++v+++G ++W+ Ia ++ gR +kqc++rw+++l XP_019178330.1 135 KGQWTEEEDRLLIRLVNEHGDRRWSVIATKIV-GRAGKQCRERWHNHL 181 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 46.7 | 7.2e-15 | 187 | 229 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W + ++ llv +++qlG++ W+ Ia++++ gR+++++k++w+ XP_019178330.1 187 KESWNEGDERLLVAVHEQLGNR-WSEIAKRIP-GRSENSIKNHWN 229 568*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence |
MDGSGGSGYR PFSINFPNPI LPPFPPVIVH RRYNHQEILP FPESFGSSSF HGGASSTNSR 60 LPAADAATAS WLSHLQNVNF GGSCGSLPHG LVAPPPASWG NQNRENAFAA GSLEETRREK 120 EHDERRSSNG VAFIKGQWTE EEDRLLIRLV NEHGDRRWSV IATKIVGRAG KQCRERWHNH 180 LRPDIKKESW NEGDERLLVA VHEQLGNRWS EIAKRIPGRS ENSIKNHWNA TKRRLFSKRR 240 MRSSSLQDAG SSRAGGRRSS VVLQNYIKYK YFSGLSLGQP GSSLVPEQPS IQQQVNVDDS 300 PSILTETYDD EMNFMQKLFG NSSSSSTSPT AANNGSRSDN SAEFAAFGRR TNEVDSVPEE 360 ESGSTYLASD PNLYEMGGAD QINSSTPQAP AANNTNSGAG YGSAAASHCG TPPLNRWSSS 420 ATAAAMDMDL MDLVSAASSS HCPHGYGSCC TKTPRQMF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58850.1 | 2e-55 | MYB family protein |